Specialist Software Engineer - R&D Omics
Amgen
Specialist Software Engineer - R&D Omics
Job Description
At Amgen, if you feel like you’re part of something bigger, it’s because you are. Our shared mission—to serve patients living with serious illnesses—drives all that we do.
What you will do
- Develop software to transform and visualize omics (genomics, proteomics, transcriptomics) data using programming languages such as Python, Java, R
- Develop data processing pipelines for large datasets in the cloud (e.g. Nextflow); integrate with other data sources where applicable
- Collaborate with the other engineering team members to ensure all services are reliable, maintainable, and well-integrated into existing platforms
- Adhere to best practices for testing and designing reusable code
- Ensure effective communication between scientific area management, technical staff and vendors to analyze scientific needs and implement informatics solutions in data acquisition, integration and analysis
What we expect of you
- Master’s degree and 4 to 6 years of experience in Software Development, IT, or related field
- OR Bachelor’s degree and 6 to 8 years of experience in Software Development, IT, or related field
- OR Diploma and 10 to 12 years of experience in Software Development, IT, or related field
- Basic Qualifications: Proficiency in code development (Python, R) and the software development lifecycle
- Experience with Application development (RShiny, Plotly Dash, etc)
- Proficient with SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks)
- Experience with cloud computing platforms and infrastructure
- Preferred Qualifications: 3+ years of experience in biopharma or life sciences
- Experience in pipeline development using one or more of the following programming languages (Python, Nextflow, etc)
- Experience in RESTFul API development e.g flask, MuleSoft
- Experience with Benchling (LIMS) development
- Experience with Bioinformatics tools, development and usage
- Experience with installing software and configuring linux-based systems
- Experience with AI/ML tools e.g. Sagemaker, LLM
- Work experience in the biotechnology or pharmaceutical industry
- Experience using and adopting Agile Framework
Must-Have Skills
- Code development (e.g. Python, Nextflow, R, Java)
- Systems administration / application management
- CI/CD processes
- Cloud computing technologies (e.g. AWS, Google Cloud)
- Working with multi-functional teams (software/data engineers, business analysts, architects, cloud infrastructure teams)
- Agile practices
- Effective communication skills
- SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks)
- Application development (RShiny, Plotly Dash)
- RESTFul API development (e.g. Flask, MuleSoft)
- Benchling (LIMS) development
- Bioinformatics tools
- Installing software and configuring Linux-based systems
- AI/ML tools (e.g. Sagemaker, LLM)
Good-to-Have Skills
- Soft Skills: Strong learning agility, Collaborative with good communication skills, High degree of initiative and self-motivation, Ability to manage multiple priorities successfully, Team-oriented with a focus on achieving team goals
Locations
- Hyderabad, India
Salary
Salary not disclosed
Estimated Salary Rangehigh confidence
25,000 - 45,000 USD / yearly
Source: xAI estimated
* This is an estimated range based on market data and may vary based on experience and qualifications.
Skills Required
- Code development (e.g. Python, Nextflow, R, Java)intermediate
- Systems administration / application managementintermediate
- CI/CD processesintermediate
- Cloud computing technologies (e.g. AWS, Google Cloud)intermediate
- Working with multi-functional teams (software/data engineers, business analysts, architects, cloud infrastructure teams)intermediate
- Agile practicesintermediate
- Effective communication skillsintermediate
- SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks)intermediate
- Application development (RShiny, Plotly Dash)intermediate
- RESTFul API development (e.g. Flask, MuleSoft)intermediate
- Benchling (LIMS) developmentintermediate
- Bioinformatics toolsintermediate
- Installing software and configuring Linux-based systemsintermediate
- AI/ML tools (e.g. Sagemaker, LLM)intermediate
- Soft Skills: Strong learning agility, Collaborative with good communication skills, High degree of initiative and self-motivation, Ability to manage multiple priorities successfully, Team-oriented with a focus on achieving team goalsintermediate
Required Qualifications
- Master’s degree and 4 to 6 years of experience in Software Development, IT, or related field (experience)
- OR Bachelor’s degree and 6 to 8 years of experience in Software Development, IT, or related field (experience)
- OR Diploma and 10 to 12 years of experience in Software Development, IT, or related field (experience)
- Basic Qualifications: Proficiency in code development (Python, R) and the software development lifecycle (experience)
- Experience with Application development (RShiny, Plotly Dash, etc) (experience)
- Proficient with SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks) (experience)
- Experience with cloud computing platforms and infrastructure (experience)
- Preferred Qualifications: 3+ years of experience in biopharma or life sciences (experience)
- Experience in pipeline development using one or more of the following programming languages (Python, Nextflow, etc) (experience)
- Experience in RESTFul API development e.g flask, MuleSoft (experience)
- Experience with Benchling (LIMS) development (experience)
- Experience with Bioinformatics tools, development and usage (experience)
- Experience with installing software and configuring linux-based systems (experience)
- Experience with AI/ML tools e.g. Sagemaker, LLM (experience)
- Work experience in the biotechnology or pharmaceutical industry (experience)
- Experience using and adopting Agile Framework (experience)
Responsibilities
- Develop software to transform and visualize omics (genomics, proteomics, transcriptomics) data using programming languages such as Python, Java, R
- Develop data processing pipelines for large datasets in the cloud (e.g. Nextflow); integrate with other data sources where applicable
- Collaborate with the other engineering team members to ensure all services are reliable, maintainable, and well-integrated into existing platforms
- Adhere to best practices for testing and designing reusable code
- Ensure effective communication between scientific area management, technical staff and vendors to analyze scientific needs and implement informatics solutions in data acquisition, integration and analysis
Tags & Categories
Specialist Software Engineer - R&D Omics
Amgen
Specialist Software Engineer - R&D Omics
Job Description
At Amgen, if you feel like you’re part of something bigger, it’s because you are. Our shared mission—to serve patients living with serious illnesses—drives all that we do.
What you will do
- Develop software to transform and visualize omics (genomics, proteomics, transcriptomics) data using programming languages such as Python, Java, R
- Develop data processing pipelines for large datasets in the cloud (e.g. Nextflow); integrate with other data sources where applicable
- Collaborate with the other engineering team members to ensure all services are reliable, maintainable, and well-integrated into existing platforms
- Adhere to best practices for testing and designing reusable code
- Ensure effective communication between scientific area management, technical staff and vendors to analyze scientific needs and implement informatics solutions in data acquisition, integration and analysis
What we expect of you
- Master’s degree and 4 to 6 years of experience in Software Development, IT, or related field
- OR Bachelor’s degree and 6 to 8 years of experience in Software Development, IT, or related field
- OR Diploma and 10 to 12 years of experience in Software Development, IT, or related field
- Basic Qualifications: Proficiency in code development (Python, R) and the software development lifecycle
- Experience with Application development (RShiny, Plotly Dash, etc)
- Proficient with SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks)
- Experience with cloud computing platforms and infrastructure
- Preferred Qualifications: 3+ years of experience in biopharma or life sciences
- Experience in pipeline development using one or more of the following programming languages (Python, Nextflow, etc)
- Experience in RESTFul API development e.g flask, MuleSoft
- Experience with Benchling (LIMS) development
- Experience with Bioinformatics tools, development and usage
- Experience with installing software and configuring linux-based systems
- Experience with AI/ML tools e.g. Sagemaker, LLM
- Work experience in the biotechnology or pharmaceutical industry
- Experience using and adopting Agile Framework
Must-Have Skills
- Code development (e.g. Python, Nextflow, R, Java)
- Systems administration / application management
- CI/CD processes
- Cloud computing technologies (e.g. AWS, Google Cloud)
- Working with multi-functional teams (software/data engineers, business analysts, architects, cloud infrastructure teams)
- Agile practices
- Effective communication skills
- SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks)
- Application development (RShiny, Plotly Dash)
- RESTFul API development (e.g. Flask, MuleSoft)
- Benchling (LIMS) development
- Bioinformatics tools
- Installing software and configuring Linux-based systems
- AI/ML tools (e.g. Sagemaker, LLM)
Good-to-Have Skills
- Soft Skills: Strong learning agility, Collaborative with good communication skills, High degree of initiative and self-motivation, Ability to manage multiple priorities successfully, Team-oriented with a focus on achieving team goals
Locations
- Hyderabad, India
Salary
Salary not disclosed
Estimated Salary Rangehigh confidence
25,000 - 45,000 USD / yearly
Source: xAI estimated
* This is an estimated range based on market data and may vary based on experience and qualifications.
Skills Required
- Code development (e.g. Python, Nextflow, R, Java)intermediate
- Systems administration / application managementintermediate
- CI/CD processesintermediate
- Cloud computing technologies (e.g. AWS, Google Cloud)intermediate
- Working with multi-functional teams (software/data engineers, business analysts, architects, cloud infrastructure teams)intermediate
- Agile practicesintermediate
- Effective communication skillsintermediate
- SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks)intermediate
- Application development (RShiny, Plotly Dash)intermediate
- RESTFul API development (e.g. Flask, MuleSoft)intermediate
- Benchling (LIMS) developmentintermediate
- Bioinformatics toolsintermediate
- Installing software and configuring Linux-based systemsintermediate
- AI/ML tools (e.g. Sagemaker, LLM)intermediate
- Soft Skills: Strong learning agility, Collaborative with good communication skills, High degree of initiative and self-motivation, Ability to manage multiple priorities successfully, Team-oriented with a focus on achieving team goalsintermediate
Required Qualifications
- Master’s degree and 4 to 6 years of experience in Software Development, IT, or related field (experience)
- OR Bachelor’s degree and 6 to 8 years of experience in Software Development, IT, or related field (experience)
- OR Diploma and 10 to 12 years of experience in Software Development, IT, or related field (experience)
- Basic Qualifications: Proficiency in code development (Python, R) and the software development lifecycle (experience)
- Experience with Application development (RShiny, Plotly Dash, etc) (experience)
- Proficient with SQL and relational databases (e.g PostgreSQL, MySQL, Oracle, Databricks) (experience)
- Experience with cloud computing platforms and infrastructure (experience)
- Preferred Qualifications: 3+ years of experience in biopharma or life sciences (experience)
- Experience in pipeline development using one or more of the following programming languages (Python, Nextflow, etc) (experience)
- Experience in RESTFul API development e.g flask, MuleSoft (experience)
- Experience with Benchling (LIMS) development (experience)
- Experience with Bioinformatics tools, development and usage (experience)
- Experience with installing software and configuring linux-based systems (experience)
- Experience with AI/ML tools e.g. Sagemaker, LLM (experience)
- Work experience in the biotechnology or pharmaceutical industry (experience)
- Experience using and adopting Agile Framework (experience)
Responsibilities
- Develop software to transform and visualize omics (genomics, proteomics, transcriptomics) data using programming languages such as Python, Java, R
- Develop data processing pipelines for large datasets in the cloud (e.g. Nextflow); integrate with other data sources where applicable
- Collaborate with the other engineering team members to ensure all services are reliable, maintainable, and well-integrated into existing platforms
- Adhere to best practices for testing and designing reusable code
- Ensure effective communication between scientific area management, technical staff and vendors to analyze scientific needs and implement informatics solutions in data acquisition, integration and analysis
Tags & Categories